ribA
 
Information for ribA, and also upstream and downstream flanking genes:
Genome coordinates
Orientation
Gene type
Name
EcoGene
Annotation
1333855-1336530
+
CDS
aconitate hydrase 1
1336594-1337184
-
CDS
ribA
GTP cyclohydrolase II
1337354-1338118
+
CDS
non-essential phosphatidylglycerophosphate phosphatase; membrane bound
 
Reported regulatory sites for ribA:
Genome coordinates
Source
Transcription factor
Transcription factor annotation
 
Species with an ortholog: HI PA SP ST EC VC YP
 
Predictions with an average map value >= the critical MAP value (p=0.05):
Avg. MAP
Genome coordinates
Sequence
Site type
Overlap (bp)
Repeat
Model logo
Prediction logo
Prediction alignment
 
Predictions with an average map value < the critical MAP value (p=0.05):
Avg. MAP
Genome coordinates
Sequence
Site type
Overlap (bp)
Repeat
Model logo
Prediction logo
Prediction alignment
1.948
1337283-1337299 R
ccagg AAAAATTGACAGATTTG tgcca
-
0
-
1.237
1337214-1337234 R
cttct CGTTATGGCAAAATAAGCCAA tacag
-
0
-
0.852
1337305-1337321 R
atcat AACTGAAAACGCCAGTT ccagg
-
0
-
 
Critical MAP values:
p=0.01
4.80
p=0.05
3.45
p=0.1
2.95
p=0.2
2.42

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