ribE
 
Information for ribE, and also upstream and downstream flanking genes:
Genome coordinates
Orientation
Gene type
Name
EcoGene
Annotation
1739437-1740585
+
CDS
cyclopropane fatty acyl phospholipid synthase
1740625-1741266
-
CDS
ribE
riboflavin synthase; alpha chain
1741481-1742854
+
CDS
putative transport protein
 
Reported regulatory sites for ribE:
Genome coordinates
Source
Transcription factor
Transcription factor annotation
 
Species with an ortholog: HI PA SP ST EC VC YP
 
Predictions with an average map value >= the critical MAP value (p=0.05):
Avg. MAP
Genome coordinates
Sequence
Site type
Overlap (bp)
Repeat
Model logo
Prediction logo
Prediction alignment
 
Predictions with an average map value < the critical MAP value (p=0.05):
Avg. MAP
Genome coordinates
Sequence
Site type
Overlap (bp)
Repeat
Model logo
Prediction logo
Prediction alignment
2.680
1741356-1741377 R
gattt ATTAATTCTCCAGTGAAAAAAT agcca
-
0
-
2.128
1741316-1741337 R
ccttc ACTGGTAAGGGCGTTTTCCACC tgcta
-
0
-
1.831
1741390-1741406 R
gcagg GGAAATTCAGTCTATTG tagcg
-
0
-
 
Critical MAP values:
p=0.01
4.80
p=0.05
3.45
p=0.1
2.95
p=0.2
2.42

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