ribH
 
Information for ribH, and also upstream and downstream flanking genes:
Genome coordinates
Orientation
Gene type
Name
EcoGene
Annotation
432679-433782
+
CDS
bifunctional pyrimidine deaminase/reductase in pathway of riboflavin synthesis
433871-434341
+
CDS
ribH
riboflavin synthase; beta chain
434361-434780
+
CDS
transcription termination; L factor
 
Reported regulatory sites for ribH:
Genome coordinates
Source
Transcription factor
Transcription factor annotation
 
Species with an ortholog: HI PA SP ST EC VC YP
 
Predictions with an average map value >= the critical MAP value (p=0.05):
Avg. MAP
Genome coordinates
Sequence
Site type
Overlap (bp)
Repeat
Model logo
Prediction logo
Prediction alignment
3.928
433831-433847
aaatc CGCCCCCCTGCGGGGCC atact
-
0
-
3.660
433814-433830
cacga AATATTATGCTAAAATC cgccc
-
0
-
 
Predictions with an average map value < the critical MAP value (p=0.05):
Avg. MAP
Genome coordinates
Sequence
Site type
Overlap (bp)
Repeat
Model logo
Prediction logo
Prediction alignment
0.131
433782-433805
gcatg ATCTCCCGGCTCGAAAGGGAAGCA gcgca
-
0
-
 
Critical MAP values:
p=0.01
4.80
p=0.05
3.45
p=0.1
2.95
p=0.2
2.42

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