|
rimK
|
| |
| Information
for rimK, and also upstream and downstream flanking genes: |
|
Genome
coordinates
|
Orientation
|
Gene
type
|
Name
|
EcoGene
|
Annotation
|
|
890407-891129
|
+
|
CDS
|
|
|
modulator of drug activity A
|
|
891190-892092
|
+
|
CDS
|
rimK
|
|
ribosomal protein S6 modification protein
|
|
892180-892656
|
+
|
CDS
|
|
|
putative sensory transduction regulator
|
|
| |
Reported regulatory
sites for rimK:
|
Genome
coordinates
|
Source
|
Transcription
factor
|
Transcription
factor annotation
|
|
| |
| Species with
an ortholog: HI PA SP ST EC VC |
| |
Predictions
with an average map value >= the critical MAP value (p=0.05):
|
Avg.
MAP
|
Genome
coordinates
|
Sequence
|
Site
type
|
Overlap
(bp)
|
Repeat
|
Model
logo
|
Prediction
logo
|
Prediction
alignment
|
|
| |
Predictions
with an average map value < the critical MAP value (p=0.05):
|
Avg.
MAP
|
Genome
coordinates
|
Sequence
|
Site
type
|
Overlap
(bp)
|
Repeat
|
Model
logo
|
Prediction
logo
|
Prediction
alignment
|
|
3.210
|
891139-891159
|
gccac GTCGATGTATGATACGCGGGC ttttg
|
-
|
0
|
-
|
|
|
|
|
| |
Critical
MAP values:
|
p=0.01
|
4.76
|
|
p=0.05
|
3.70
|
|
p=0.1
|
3.23
|
|
p=0.2
|
2.71
|
|
|