rmf
 
Information for rmf, and also upstream and downstream flanking genes:
Genome coordinates
Orientation
Gene type
Name
EcoGene
Annotation
1014134-1014682
+
CDS
orf; hypothetical protein
1014938-1015105
+
CDS
rmf
ribosome modulation factor
1015175-1015693
-
CDS
beta-hydroxydecanoyl thioester dehydrase; trans-2-decenoyl-ACP isomerase
 
Reported regulatory sites for rmf:
Genome coordinates
Source
Transcription factor
Transcription factor annotation
 
Species with an ortholog: ST EC YP
 
Predictions with an average map value >= the critical MAP value (p=0.05):
Avg. MAP
Genome coordinates
Sequence
Site type
Overlap (bp)
Repeat
Model logo
Prediction logo
Prediction alignment
6.389
1014804-1014826
tgtag CTCACAAATATGACAGTGGCGTG aattt
-
0
-
 
Predictions with an average map value < the critical MAP value (p=0.05):
Avg. MAP
Genome coordinates
Sequence
Site type
Overlap (bp)
Repeat
Model logo
Prediction logo
Prediction alignment
6.020
1014873-1014895
taact GTGATTGCACATTTAGTAATCAC tgttt
-
0
-
5.747
1014906-1014929
tcttt TCCACCAGAAACCAGTATGAGGGA aacga
-
0
-
 
Critical MAP values:
p=0.01
7.30
p=0.05
6.05
p=0.1
5.26
p=0.2
4.60

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