|
rob
|
| |
| Information
for rob, and also upstream and downstream flanking genes: |
|
Genome
coordinates
|
Orientation
|
Gene
type
|
Name
|
EcoGene
|
Annotation
|
|
4631366-4632013
|
+
|
CDS
|
|
|
phosphoglyceromutase 2
|
|
4632010-4632879
|
-
|
CDS
|
rob
|
|
right origin-binding protein
|
|
4633090-4633563
|
+
|
CDS
|
|
|
orf; hypothetical protein
|
|
| |
Reported regulatory
sites for rob:
|
Genome
coordinates
|
Source
|
Transcription
factor
|
Transcription
factor annotation
|
|
| |
| Species with
an ortholog: ST EC YP |
| |
Predictions
with an average map value >= the critical MAP value (p=0.05):
|
Avg.
MAP
|
Genome
coordinates
|
Sequence
|
Site
type
|
Overlap
(bp)
|
Repeat
|
Model
logo
|
Prediction
logo
|
Prediction
alignment
|
|
| |
Predictions
with an average map value < the critical MAP value (p=0.05):
|
Avg.
MAP
|
Genome
coordinates
|
Sequence
|
Site
type
|
Overlap
(bp)
|
Repeat
|
Model
logo
|
Prediction
logo
|
Prediction
alignment
|
|
2.890
|
4632886-4632909 R
|
tcagg TGCTCGTTGTTGAAAGGATGAGGA tattt
|
-
|
0
|
-
|
|
|
|
|
2.264
|
4632928-4632943 R
|
acagc AAAAAATGCTATTATC caatt
|
-
|
0
|
-
|
|
|
|
|
1.897
|
4632952-4632968 R
|
taaga AAAAAACACTGAATGCT aaaac
|
-
|
0
|
-
|
|
|
|
|
| |
Critical
MAP values:
|
p=0.01
|
7.30
|
|
p=0.05
|
6.05
|
|
p=0.1
|
5.26
|
|
p=0.2
|
4.60
|
|
|