rpiB
 
Information for rpiB, and also upstream and downstream flanking genes:
Genome coordinates
Orientation
Gene type
Name
EcoGene
Annotation
4309680-4310603
-
CDS
transcriptional repressor of rpiB expression
4310929-4311378
+
CDS
rpiB
ribose 5-phosphate isomerase B
4311389-4311796
-
CDS
orf; hypothetical protein
 
Reported regulatory sites for rpiB:
Genome coordinates
Source
Transcription factor
Transcription factor annotation
 
Species with an ortholog: EC YP
 
Predictions with an average map value >= the critical MAP value (p=0.05):
Avg. MAP
Genome coordinates
Sequence
Site type
Overlap (bp)
Repeat
Model logo
Prediction logo
Prediction alignment
 
Predictions with an average map value < the critical MAP value (p=0.05):
Avg. MAP
Genome coordinates
Sequence
Site type
Overlap (bp)
Repeat
Model logo
Prediction logo
Prediction alignment
1.455
4310653-4310672
aaaaa ATAAAATTTATAAAGTTTAT tttat
-
0
-
0.947
4310726-4310742
agttt AAAAACATGATGTTATT tgttt
-
0
-
-
0.872
4310875-4310898
attca TTAACATCACAAATGTTTTTTGAT tgtga
-
0
-
 
Critical MAP values:
p=0.01
5.55
p=0.05
3.60
p=0.1
3.00
p=0.2
2.32

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