rplL
 
Information for rplL, and also upstream and downstream flanking genes:
Genome coordinates
Orientation
Gene type
Name
EcoGene
Annotation
4177574-4178071
+
CDS
50S ribosomal subunit protein L10
4178138-4178503
+
CDS
rplL
50S ribosomal subunit protein L7/L12
4178823-4182851
+
CDS
RNA polymerase; beta subunit
 
Reported regulatory sites for rplL:
Genome coordinates
Source
Transcription factor
Transcription factor annotation
 
Species with an ortholog: HI PA SP ST EC VC YP
 
Predictions with an average map value >= the critical MAP value (p=0.05):
Avg. MAP
Genome coordinates
Sequence
Site type
Overlap (bp)
Repeat
Model logo
Prediction logo
Prediction alignment
 
Predictions with an average map value < the critical MAP value (p=0.05):
Avg. MAP
Genome coordinates
Sequence
Site type
Overlap (bp)
Repeat
Model logo
Prediction logo
Prediction alignment
3.375
4178113-4178129
aactt ATTCTGATATTCAGGAA caatt
-
0
-
2.046
4178101-4178119
cgctt ACGTATAAACTTATTCTGA tattc
-
0
-
0.826
4178069-4178084
ctgct TAATCGCAGTTATCTT tttaa
-
0
-
0.826
4178086-4178101
tcttt TTAACGCATTCGCTTA cgtat
-
0
-
 
Critical MAP values:
p=0.01
4.80
p=0.05
3.45
p=0.1
2.95
p=0.2
2.42

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