rplM
 
Information for rplM, and also upstream and downstream flanking genes:
Genome coordinates
Orientation
Gene type
Name
EcoGene
Annotation
3375450-3375842
-
CDS
30S ribosomal subunit protein S9
3375858-3376286
-
CDS
rplM
50S ribosomal subunit protein L13
3376505-3377632
-
CDS
orf; hypothetical protein
 
Reported regulatory sites for rplM:
Genome coordinates
Source
Transcription factor
Transcription factor annotation
 
Species with an ortholog: HI PA SP ST EC VC YP
 
Predictions with an average map value >= the critical MAP value (p=0.05):
Avg. MAP
Genome coordinates
Sequence
Site type
Overlap (bp)
Repeat
Model logo
Prediction logo
Prediction alignment
5.095
3376432-3376454 R
tctct ATAATCCTGCGACCCCACGTTAC aagaa
-
0
-
 
Predictions with an average map value < the critical MAP value (p=0.05):
Avg. MAP
Genome coordinates
Sequence
Site type
Overlap (bp)
Repeat
Model logo
Prediction logo
Prediction alignment
3.348
3376343-3376360 R
gactt TGTCGTGTGAACCTCAAC aattg
-
0
-
3.348
3376315-3376332 R
aagac GTTTGGGTGTTCACCAAC gtgta
-
0
-
3.116
3376376-3376391 R
gcata GGCTATTCGAAGGGGT aggtt
-
0
-
 
Critical MAP values:
p=0.01
4.80
p=0.05
3.45
p=0.1
2.95
p=0.2
2.42

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