rplY
 
Information for rplY, and also upstream and downstream flanking genes:
Genome coordinates
Orientation
Gene type
Name
EcoGene
Annotation
2278652-2280412
+
CDS
putative ATP-dependent helicase
2280537-2280821
+
CDS
rplY
50S ribosomal subunit protein L25
2280960-2281967
-
CDS
orf; hypothetical protein
 
Reported regulatory sites for rplY:
Genome coordinates
Source
Transcription factor
Transcription factor annotation
 
Species with an ortholog: HI SP ST EC VC YP
 
Predictions with an average map value >= the critical MAP value (p=0.05):
Avg. MAP
Genome coordinates
Sequence
Site type
Overlap (bp)
Repeat
Model logo
Prediction logo
Prediction alignment
7.540
2280491-2280514
cttac CTGTTGCTGGGTCGCCTGTAGCAG gatta
-
0
-
 
Predictions with an average map value < the critical MAP value (p=0.05):
Avg. MAP
Genome coordinates
Sequence
Site type
Overlap (bp)
Repeat
Model logo
Prediction logo
Prediction alignment
2.943
2280436-2280457
tataa GGCGATTGAGTATAGAATCTCG cccgc
-
0
-
2.943
2280460-2280481
tcgcc CGCTTTTGCATACGCAAAGCAG atcac
-
0
-
2.241
2280410-2280427
gcggt TAATGGTAGTTTTGATTG atgta
-
0
-
 
Critical MAP values:
p=0.01
5.41
p=0.05
4.01
p=0.1
3.43
p=0.2
2.86

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