rpmE
 
Information for rpmE, and also upstream and downstream flanking genes:
Genome coordinates
Orientation
Gene type
Name
EcoGene
Annotation
4122192-4124390
-
CDS
primosomal protein N'(= factor Y)(putative helicase)
4124593-4124805
+
CDS
rpmE
50S ribosomal subunit protein L31
4124866-4125474
-
CDS
orf; hypothetical protein
 
Reported regulatory sites for rpmE:
Genome coordinates
Source
Transcription factor
Transcription factor annotation
 
Species with an ortholog: HI PA SP ST EC YP
 
Predictions with an average map value >= the critical MAP value (p=0.05):
Avg. MAP
Genome coordinates
Sequence
Site type
Overlap (bp)
Repeat
Model logo
Prediction logo
Prediction alignment
 
Predictions with an average map value < the critical MAP value (p=0.05):
Avg. MAP
Genome coordinates
Sequence
Site type
Overlap (bp)
Repeat
Model logo
Prediction logo
Prediction alignment
3.181
4124559-4124577
ggctg GAAGAGCGACGCGGCCTTA aaccg
-
0
-
2.103
4124391-4124407
ggcat AGCATCATCCTGACTTG aaatt
-
0
-
2.103
4124472-4124488
tggtt AATTTCTGTATGATTTC gcgcc
-
0
-
1.533
4124536-4124554
catcg CGTGGTGTCTGGCGTTAGG gctgg
-
0
-
 
Critical MAP values:
p=0.01
5.41
p=0.05
4.01
p=0.1
3.43
p=0.2
2.86

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