rpmF
 
Information for rpmF, and also upstream and downstream flanking genes:
Genome coordinates
Orientation
Gene type
Name
EcoGene
Annotation
1146017-1146538
+
CDS
orf; hypothetical protein
1146590-1146763
+
CDS
rpmF
50S ribosomal subunit protein L32
1146874-1147914
+
CDS
glycerolphosphate auxotrophy in plsB background
 
Reported regulatory sites for rpmF:
Genome coordinates
Source
Transcription factor
Transcription factor annotation
 
Species with an ortholog: ST EC YP
 
Predictions with an average map value >= the critical MAP value (p=0.05):
Avg. MAP
Genome coordinates
Sequence
Site type
Overlap (bp)
Repeat
Model logo
Prediction logo
Prediction alignment
 
Predictions with an average map value < the critical MAP value (p=0.05):
Avg. MAP
Genome coordinates
Sequence
Site type
Overlap (bp)
Repeat
Model logo
Prediction logo
Prediction alignment
4.843
1146569-1146585
taaac CGTAATTGAGGAGTAAG gtcca
-
0
-
 
Critical MAP values:
p=0.01
7.30
p=0.05
6.05
p=0.1
5.26
p=0.2
4.60

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