rpmI

Information for rpmI, and also upstream and downstream flanking genes:

Genome coordinates Orientation Gene type Name EcoGene Annotation 1797417-1797773 - CDS rplT EG10881 50S ribosomal subunit protein L20; and regulator 1797826-1798023 - CDS rpmI EG11231 50S ribosomal subunit protein A 1798120-1798662 - CDS infC EG10506 protein chain initiation factor IF-3

Reported regulatory sites for rpmI: Genome coordinates Source Transcription factor Transcription factor annotation

Species with an ortholog: HI ST EC YP

Predictions with an average map value >= the critical MAP value (p=0.05): Avg. MAP Genome coordinates Sequence Site type Overlap (bp) Repeat Model logo Prediction logo Prediction alignment 5.498 1798037-1798053 R tcgtt TATTAACAATGCGAAGT ggaag - 0 -

Predictions with an average map value < the critical MAP value (p=0.05): Avg. MAP Genome coordinates Sequence Site type Overlap (bp) Repeat Model logo Prediction logo Prediction alignment 4.111 1798105-1798122 R aacag TAAGGCCTTCAAGTAGCA ctgtc - 0 - 4.111 1798080-1798097 R gtctg TGGAGCCTTCGGGCTTCA caggc - 0 - 0.324 1798063-1798079 R cttca CAGGCTTTGTTCGCCTT tgttt - 0 -

Critical MAP values: p=0.01 6.66 p=0.05 5.31 p=0.1 4.59 p=0.2 3.95

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