rpoH
|
Genome
coordinates
|
Orientation
|
Gene
type
|
Name
|
EcoGene
|
Annotation
|
|
3596186-3597346
|
-
|
CDS
|
high-affinity amino acid transport system; periplasmic binding protein
|
||
|
3597560-3598414
|
-
|
CDS
|
rpoH
|
RNA polymerase; sigma(32) factor; regulation of proteins induced at high temperatures
|
|
|
3598659-3599717
|
-
|
CDS
|
cell division membrane protein
|
|
Genome
coordinates
|
Source
|
Transcription
factor
|
Transcription
factor annotation
|
|
3598511-3598532
|
crp
|
cyclic AMP receptor protein
|
|
|
3598564-3598582
|
crp
|
cyclic AMP receptor protein
|
|
|
3598533-3598564
|
cytR
|
regulator for deo operon udp cdd tsx nupC and nupG
|
|
|
3598542-3598556
|
dnaA
|
DNA biosynthesis; initiation of chromosome replication; can be transcription regulator
|
|
|
3598518-3598532
|
dnaA
|
DNA biosynthesis; initiation of chromosome replication; can be transcription regulator
|
|
Avg.
MAP
|
Genome
coordinates
|
Sequence
|
Site
type
|
Overlap
(bp)
|
Repeat
|
Model
logo
|
Prediction
logo
|
Prediction
alignment
|
|
Avg.
MAP
|
Genome
coordinates
|
Sequence
|
Site
type
|
Overlap
(bp)
|
Repeat
|
Model
logo
|
Prediction
logo
|
Prediction
alignment
|
|
2.479
|
3598641-3598660 R
|
tgaat AATAAAAGCGTGTTATACTC tttcc
|
-
|
0
|
-
|
 |
 |
 |
|
2.479
|
3598506-3598525 R
|
ttgtg GATAAAATCACGGTCTGATA aaaca
|
dnaA
crp |
8
15 |
-
|
|
|
|
|
1.555
|
3598483-3598505 R
|
tgata AAACAGTGAATGATAACCTCGTT gctct
|
-
|
0
|
-
|
 |
 |
|
|
1.419
|
3598562-3598584 R
|
cggta TTTCATCTCTATGTCACATTTTG tgcgt
|
cytR
crp |
3
19 |
-
|
 |
 |
|
|
1.419
|
3598526-3598548 R
|
ttatt CACAAGCTTGCATTGAACTTGTG gataa
|
cytR
dnaA crp |
16
14 7 |
-
|
|
|
|
Critical
MAP values:
|