rpoZ

Information for rpoZ, and also upstream and downstream flanking genes:

Genome coordinates Orientation Gene type Name EcoGene Annotation 3819055-3819678 + CDS gmk EG10965 guanylate kinase 3819733-3820008 + CDS rpoZ EG10899 RNA polymerase; omega subunit 3820027-3822135 + CDS spoT EG10966 (p)ppGpp synthetase II; also guanosine-3';5'-bis pyrophosphate 3'-pyrophosphohydrolase

Reported regulatory sites for rpoZ: Genome coordinates Source Transcription factor Transcription factor annotation

Species with an ortholog: HI SP ST EC VC YP

Predictions with an average map value >= the critical MAP value (p=0.05): Avg. MAP Genome coordinates Sequence Site type Overlap (bp) Repeat Model logo Prediction logo Prediction alignment 4.995 3819689-3819707 atttc AGTATCATGCCCAGTCATT tcttc - 0 - 4.813 3819708-3819723 tcatt TCTTCACCTGTGGAGC ttttt - 0 -

Predictions with an average map value < the critical MAP value (p=0.05): Avg. MAP Genome coordinates Sequence Site type Overlap (bp) Repeat Model logo Prediction logo Prediction alignment

Critical MAP values: p=0.01 5.41 p=0.05 4.01 p=0.1 3.43 p=0.2 2.86

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