rpsG
 
Information for rpsG, and also upstream and downstream flanking genes:
Genome coordinates
Orientation
Gene type
Name
EcoGene
Annotation
3469037-3471151
-
CDS
GTP-binding protein chain elongation factor EF-G
3471179-3471718
-
CDS
rpsG
30S ribosomal subunit protein S7; initiates assembly
3471815-3472189
-
CDS
30S ribosomal subunit protein S12
 
Reported regulatory sites for rpsG:
Genome coordinates
Source
Transcription factor
Transcription factor annotation
 
Species with an ortholog: HI PA SP ST EC VC YP
 
Predictions with an average map value >= the critical MAP value (p=0.05):
Avg. MAP
Genome coordinates
Sequence
Site type
Overlap (bp)
Repeat
Model logo
Prediction logo
Prediction alignment
5.016
3471785-3471804 R
ctccg TTAAGTAAGGCCAAACGTTT taact
-
0
-
5.016
3471739-3471758 R
ctcgt AGAGTTTTGGACAATCCTGA attaa
-
0
-
 
Predictions with an average map value < the critical MAP value (p=0.05):
Avg. MAP
Genome coordinates
Sequence
Site type
Overlap (bp)
Repeat
Model logo
Prediction logo
Prediction alignment
3.239
3471720-3471736 R
tgaat TAACAACGGAGTATTTC catgc
-
0
-
2.891
3471762-3471782 R
tttta ACTTAAATGTCAAACTAAACT cgtag
-
0
-
 
Critical MAP values:
p=0.01
4.80
p=0.05
3.45
p=0.1
2.95
p=0.2
2.42

Click here to go back