sbcB
 
Information for sbcB, and also upstream and downstream flanking genes:
Genome coordinates
Orientation
Gene type
Name
EcoGene
Annotation
2079403-2080575
-
CDS
penicillin binding protein 6b
2080778-2082205
+
CDS
sbcB
exonuclease I; 3' --> 5' specific; deoxyribophosphodiesterase
2082248-2082475
-
CDS
orf; hypothetical protein
 
Reported regulatory sites for sbcB:
Genome coordinates
Source
Transcription factor
Transcription factor annotation
 
Species with an ortholog: HI PA SP ST EC VC YP
 
Predictions with an average map value >= the critical MAP value (p=0.05):
Avg. MAP
Genome coordinates
Sequence
Site type
Overlap (bp)
Repeat
Model logo
Prediction logo
Prediction alignment
 
Predictions with an average map value < the critical MAP value (p=0.05):
Avg. MAP
Genome coordinates
Sequence
Site type
Overlap (bp)
Repeat
Model logo
Prediction logo
Prediction alignment
1.080
2080588-2080608
ggagt TTCAAATAGCTGTTCTTTTTA cggaa
-
0
-
1.080
2080719-2080739
aaagc TGATTAGCACGGTGATATTTG atact
-
0
-
0.743
2080668-2080689
tcatt TTTATCTGACATGATCTGTTGC cactc
-
0
-
0.256
2080615-2080634
ggaaa TACTTATGAACTGGCTGGAA taaag
-
0
-
 
Critical MAP values:
p=0.01
4.80
p=0.05
3.45
p=0.1
2.95
p=0.2
2.42

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