sbp
 
Information for sbp, and also upstream and downstream flanking genes:
Genome coordinates
Orientation
Gene type
Name
EcoGene
Annotation
4105132-4106094
+
CDS
6-phosphofructokinase I
4106414-4107403
+
CDS
sbp
periplasmic sulfate-binding protein
4107510-4108265
+
CDS
CDP-diacylglycerol phosphotidylhydrolase
 
Reported regulatory sites for sbp:
Genome coordinates
Source
Transcription factor
Transcription factor annotation
 
Species with an ortholog: PA SP ST EC VC YP
 
Predictions with an average map value >= the critical MAP value (p=0.05):
Avg. MAP
Genome coordinates
Sequence
Site type
Overlap (bp)
Repeat
Model logo
Prediction logo
Prediction alignment
 
Predictions with an average map value < the critical MAP value (p=0.05):
Avg. MAP
Genome coordinates
Sequence
Site type
Overlap (bp)
Repeat
Model logo
Prediction logo
Prediction alignment
3.737
4106327-4106347
caagt TATAGCCAATCTTTTTTTATT cttta
-
0
-
3.187
4106152-4106174
aaatg CCTGATGCGCTTCGCTTATCAGG cctac
-
0
REPv302a (23)
3.187
4106368-4106390
aacct TCTGGCACGCTTTGCTCATCACA acaca
-
0
-
1.590
4106216-4106233
ttttg TAGGCCGGATAAGGCGTT cgcgc
-
0
REP302b (18)
1.590
4106234-4106251
gcgtt CGCGCCGCATCCGGCATG gacaa
-
0
REP302b (15)
 
Critical MAP values:
p=0.01
5.41
p=0.05
4.01
p=0.1
3.43
p=0.2
2.86

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