|
sbp
|
| |
| Information
for sbp, and also upstream and downstream flanking genes: |
|
Genome
coordinates
|
Orientation
|
Gene
type
|
Name
|
EcoGene
|
Annotation
|
|
4105132-4106094
|
+
|
CDS
|
|
|
6-phosphofructokinase I
|
|
4106414-4107403
|
+
|
CDS
|
sbp
|
|
periplasmic sulfate-binding protein
|
|
4107510-4108265
|
+
|
CDS
|
|
|
CDP-diacylglycerol phosphotidylhydrolase
|
|
| |
Reported regulatory
sites for sbp:
|
Genome
coordinates
|
Source
|
Transcription
factor
|
Transcription
factor annotation
|
|
| |
| Species with
an ortholog: PA SP ST EC VC YP |
| |
Predictions
with an average map value >= the critical MAP value (p=0.05):
|
Avg.
MAP
|
Genome
coordinates
|
Sequence
|
Site
type
|
Overlap
(bp)
|
Repeat
|
Model
logo
|
Prediction
logo
|
Prediction
alignment
|
|
| |
Predictions
with an average map value < the critical MAP value (p=0.05):
|
Avg.
MAP
|
Genome
coordinates
|
Sequence
|
Site
type
|
Overlap
(bp)
|
Repeat
|
Model
logo
|
Prediction
logo
|
Prediction
alignment
|
|
3.737
|
4106327-4106347
|
caagt TATAGCCAATCTTTTTTTATT cttta
|
-
|
0
|
-
|
|
|
|
|
3.187
|
4106152-4106174
|
aaatg CCTGATGCGCTTCGCTTATCAGG cctac
|
-
|
0
|
REPv302a (23)
|
|
|
|
|
3.187
|
4106368-4106390
|
aacct TCTGGCACGCTTTGCTCATCACA acaca
|
-
|
0
|
-
|
|
|
|
|
1.590
|
4106216-4106233
|
ttttg TAGGCCGGATAAGGCGTT cgcgc
|
-
|
0
|
REP302b (18)
|
|
|
|
|
1.590
|
4106234-4106251
|
gcgtt CGCGCCGCATCCGGCATG gacaa
|
-
|
0
|
REP302b (15)
|
|
|
|
|
| |
Critical
MAP values:
|
p=0.01
|
5.41
|
|
p=0.05
|
4.01
|
|
p=0.1
|
3.43
|
|
p=0.2
|
2.86
|
|
|