sdaA
 
Information for sdaA, and also upstream and downstream flanking genes:
Genome coordinates
Orientation
Gene type
Name
EcoGene
Annotation
1894194-1894772
+
CDS
orf; hypothetical protein
1894956-1896320
+
CDS
sdaA
L-serine deaminase
1896421-1898049
+
CDS
orf; hypothetical protein
 
Reported regulatory sites for sdaA:
Genome coordinates
Source
Transcription factor
Transcription factor annotation
 
Species with an ortholog: HI ST EC VC YP
 
Predictions with an average map value >= the critical MAP value (p=0.05):
Avg. MAP
Genome coordinates
Sequence
Site type
Overlap (bp)
Repeat
Model logo
Prediction logo
Prediction alignment
 
Predictions with an average map value < the critical MAP value (p=0.05):
Avg. MAP
Genome coordinates
Sequence
Site type
Overlap (bp)
Repeat
Model logo
Prediction logo
Prediction alignment
2.944
1894852-1894872
ttagt TTAATTCATGTGAATAGTTAA gccag
-
0
-
2.487
1894825-1894848
caata TTAGTTAAATCGCGGTTTTTGATT agttt
-
0
-
2.487
1894893-1894916
ccctc TTACACTATGCGCTGTTATTAGTT cgtta
-
0
-
2.324
1894805-1894822
actac TTGAGACAATCATCGCAA tatta
-
0
-
 
Critical MAP values:
p=0.01
6.03
p=0.05
4.63
p=0.1
3.98
p=0.2
3.37

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