|
sdaA
|
| |
| Information
for sdaA, and also upstream and downstream flanking genes: |
|
Genome
coordinates
|
Orientation
|
Gene
type
|
Name
|
EcoGene
|
Annotation
|
|
1894194-1894772
|
+
|
CDS
|
|
|
orf; hypothetical protein
|
|
1894956-1896320
|
+
|
CDS
|
sdaA
|
|
L-serine deaminase
|
|
1896421-1898049
|
+
|
CDS
|
|
|
orf; hypothetical protein
|
|
| |
Reported regulatory
sites for sdaA:
|
Genome
coordinates
|
Source
|
Transcription
factor
|
Transcription
factor annotation
|
|
| |
| Species with
an ortholog: HI ST EC VC YP |
| |
Predictions
with an average map value >= the critical MAP value (p=0.05):
|
Avg.
MAP
|
Genome
coordinates
|
Sequence
|
Site
type
|
Overlap
(bp)
|
Repeat
|
Model
logo
|
Prediction
logo
|
Prediction
alignment
|
|
| |
Predictions
with an average map value < the critical MAP value (p=0.05):
|
Avg.
MAP
|
Genome
coordinates
|
Sequence
|
Site
type
|
Overlap
(bp)
|
Repeat
|
Model
logo
|
Prediction
logo
|
Prediction
alignment
|
|
2.944
|
1894852-1894872
|
ttagt TTAATTCATGTGAATAGTTAA gccag
|
-
|
0
|
-
|
|
|
|
|
2.487
|
1894825-1894848
|
caata TTAGTTAAATCGCGGTTTTTGATT agttt
|
-
|
0
|
-
|
|
|
|
|
2.487
|
1894893-1894916
|
ccctc TTACACTATGCGCTGTTATTAGTT cgtta
|
-
|
0
|
-
|
|
|
|
|
2.324
|
1894805-1894822
|
actac TTGAGACAATCATCGCAA tatta
|
-
|
0
|
-
|
|
|
|
|
| |
Critical
MAP values:
|
p=0.01
|
6.03
|
|
p=0.05
|
4.63
|
|
p=0.1
|
3.98
|
|
p=0.2
|
3.37
|
|
|