secE
 
Information for secE, and also upstream and downstream flanking genes:
Genome coordinates
Orientation
Gene type
Name
EcoGene
Annotation
4173523-4174707
+
CDS
protein chain elongation factor EF-Tu (duplicate of tufA)
4174937-4175320
+
CDS
secE
preprotein translocase
4175322-4175867
+
CDS
component in transcription antitermination
 
Reported regulatory sites for secE:
Genome coordinates
Source
Transcription factor
Transcription factor annotation
 
Species with an ortholog: HI PA SP ST EC VC YP
 
Predictions with an average map value >= the critical MAP value (p=0.05):
Avg. MAP
Genome coordinates
Sequence
Site type
Overlap (bp)
Repeat
Model logo
Prediction logo
Prediction alignment
9.282
4174739-4174762
cacta AAAGGGCATCATTTGATGCCCTTT ttgca
-
0
-
3.538
4174780-4174802
gtacc AGAACCTGGCTCATCAGTGATTT tcttt
-
0
-
3.538
4174812-4174834
tgtca TAATCATTGCTGAGACAGGCTCT gttga
-
0
-
 
Predictions with an average map value < the critical MAP value (p=0.05):
Avg. MAP
Genome coordinates
Sequence
Site type
Overlap (bp)
Repeat
Model logo
Prediction logo
Prediction alignment
2.601
4174880-4174903
tttgg TTTGCCTCGCGATCGCGGGGTGAA aatgt
-
0
-
 
Critical MAP values:
p=0.01
4.80
p=0.05
3.45
p=0.1
2.95
p=0.2
2.42

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