|
selD
|
| |
| Information
for selD, and also upstream and downstream flanking genes: |
|
Genome
coordinates
|
Orientation
|
Gene
type
|
Name
|
EcoGene
|
Annotation
|
|
1843023-1844984
|
-
|
CDS
|
|
|
DNA topoisomerase III
|
|
1844989-1846032
|
-
|
CDS
|
selD
|
|
selenophosphate synthase; H(2)Se added to acrylyl-tRNA
|
|
1846149-1846700
|
-
|
CDS
|
|
|
orf; hypothetical protein
|
|
| |
Reported regulatory
sites for selD:
|
Genome
coordinates
|
Source
|
Transcription
factor
|
Transcription
factor annotation
|
|
| |
| Species with
an ortholog: HI PA SP ST EC YP |
| |
Predictions
with an average map value >= the critical MAP value (p=0.05):
|
Avg.
MAP
|
Genome
coordinates
|
Sequence
|
Site
type
|
Overlap
(bp)
|
Repeat
|
Model
logo
|
Prediction
logo
|
Prediction
alignment
|
|
| |
Predictions
with an average map value < the critical MAP value (p=0.05):
|
Avg.
MAP
|
Genome
coordinates
|
Sequence
|
Site
type
|
Overlap
(bp)
|
Repeat
|
Model
logo
|
Prediction
logo
|
Prediction
alignment
|
|
2.394
|
1846070-1846090 R
|
tctca CTTATCACTTCACGGAATGAG ggtta
|
-
|
0
|
-
|
|
|
|
|
1.490
|
1846044-1846065 R
|
gggtt ACCATACCCGGATTGCATTGAC aggag
|
-
|
0
|
-
|
|
|
|
|
1.237
|
1846110-1846132 R
|
aaact GTCTGGATTGTGAGCAAAGGCGC aggaa
|
-
|
0
|
-
|
|
|
|
|
| |
Critical
MAP values:
|
p=0.01
|
5.41
|
|
p=0.05
|
4.01
|
|
p=0.1
|
3.43
|
|
p=0.2
|
2.86
|
|
|