serA
 
Information for serA, and also upstream and downstream flanking genes:
Genome coordinates
Orientation
Gene type
Name
EcoGene
Annotation
3054261-3054809
+
CDS
putative ligase
3055198-3056430
-
CDS
serA
D-3-phosphoglycerate dehydrogenase
3056686-3057345
-
CDS
ribosephosphate isomerase; constitutive
 
Reported regulatory sites for serA:
Genome coordinates
Source
Transcription factor
Transcription factor annotation
 
Species with an ortholog: HI PA SP ST EC VC YP
 
Predictions with an average map value >= the critical MAP value (p=0.05):
Avg. MAP
Genome coordinates
Sequence
Site type
Overlap (bp)
Repeat
Model logo
Prediction logo
Prediction alignment
 
Predictions with an average map value < the critical MAP value (p=0.05):
Avg. MAP
Genome coordinates
Sequence
Site type
Overlap (bp)
Repeat
Model logo
Prediction logo
Prediction alignment
2.948
3056622-3056637 R
aattt GGTGACATGTGTCACG ctttt
-
0
-
2.404
3056509-3056526 R
atcgc GACGCAAACGTTCATATT gccgc
-
0
-
1.582
3056479-3056494 R
ttatt TTTTGATATGTTGAAA ggcgg
-
0
-
 
Critical MAP values:
p=0.01
4.80
p=0.05
3.45
p=0.1
2.95
p=0.2
2.42

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