|
sfhB
|
| |
| Information
for sfhB, and also upstream and downstream flanking genes: |
|
Genome
coordinates
|
Orientation
|
Gene
type
|
Name
|
EcoGene
|
Annotation
|
|
2732323-2733054
|
-
|
CDS
|
|
|
orf; hypothetical protein
|
|
2733051-2734031
|
-
|
CDS
|
sfhB
|
|
suppressor of ftsH mutation
|
|
2734166-2734903
|
+
|
CDS
|
|
|
orf; hypothetical protein
|
|
| |
Reported regulatory
sites for sfhB:
|
Genome
coordinates
|
Source
|
Transcription
factor
|
Transcription
factor annotation
|
|
| |
| Species with
an ortholog: HI PA SP ST EC VC YP |
| |
Predictions
with an average map value >= the critical MAP value (p=0.05):
|
Avg.
MAP
|
Genome
coordinates
|
Sequence
|
Site
type
|
Overlap
(bp)
|
Repeat
|
Model
logo
|
Prediction
logo
|
Prediction
alignment
|
|
5.332
|
2734141-2734164 R
|
tcatg ACGTTTTGACTTTCCTCAAAATGT aatac
|
-
|
0
|
-
|
|
|
|
|
4.712
|
2734077-2734100 R
|
gacca GCTACAATAGCACACTATATTAAA cggca
|
-
|
0
|
-
|
|
|
|
|
| |
Predictions
with an average map value < the critical MAP value (p=0.05):
|
Avg.
MAP
|
Genome
coordinates
|
Sequence
|
Site
type
|
Overlap
(bp)
|
Repeat
|
Model
logo
|
Prediction
logo
|
Prediction
alignment
|
|
3.368
|
2734121-2734137 R
|
gtaat ACGGGAGATTCTCTGTT cctgc
|
-
|
0
|
-
|
|
|
|
|
| |
Critical
MAP values:
|
p=0.01
|
4.80
|
|
p=0.05
|
3.45
|
|
p=0.1
|
2.95
|
|
p=0.2
|
2.42
|
|
|