sfmA
 
Information for sfmA, and also upstream and downstream flanking genes:
Genome coordinates
Orientation
Gene type
Name
EcoGene
Annotation
556098-556964
-
CDS
5;10-methylene-tetrahydrofolate dehydrogenase; 5;10-methylene-tetrahydrofolate cyclohydrolase
557402-557977
+
CDS
sfmA
putative fimbrial-like protein
558197-558889
+
CDS
putative chaperone
 
Reported regulatory sites for sfmA:
Genome coordinates
Source
Transcription factor
Transcription factor annotation
 
Species with an ortholog: ST EC
 
Predictions with an average map value >= the critical MAP value (p=0.05):
Avg. MAP
Genome coordinates
Sequence
Site type
Overlap (bp)
Repeat
Model logo
Prediction logo
Prediction alignment
 
Predictions with an average map value < the critical MAP value (p=0.05):
Avg. MAP
Genome coordinates
Sequence
Site type
Overlap (bp)
Repeat
Model logo
Prediction logo
Prediction alignment
3.438
557009-557025
tgcgc CTATTTTGTCAGAAGCG gggcg
-
0
-
2.009
557314-557331
agagt GCATATTTTCAATTAAGA cattc
-
0
-
0.203
557374-557396
tgtct TAAATAAAGTAATCGGTTATATA cggat
-
0
-
 
Critical MAP values:
p=0.01
7.59
p=0.05
6.45
p=0.1
5.76
p=0.2
5.04

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