sgcA
 
Information for sgcA, and also upstream and downstream flanking genes:
Genome coordinates
Orientation
Gene type
Name
EcoGene
Annotation
4524473-4525105
-
CDS
putative epimerase
4525117-4525548
-
CDS
sgcA
putative PTS system enzyme II A component
4525679-4526485
-
CDS
putative nucleoside triphosphatase
 
Reported regulatory sites for sgcA:
Genome coordinates
Source
Transcription factor
Transcription factor annotation
 
Species with an ortholog: ST EC YP
 
Predictions with an average map value >= the critical MAP value (p=0.05):
Avg. MAP
Genome coordinates
Sequence
Site type
Overlap (bp)
Repeat
Model logo
Prediction logo
Prediction alignment
8.125
4525653-4525673 R
gatgg GGATAAGCAGAGCGCTTATCC ccggc
-
0
-
 
Predictions with an average map value < the critical MAP value (p=0.05):
Avg. MAP
Genome coordinates
Sequence
Site type
Overlap (bp)
Repeat
Model logo
Prediction logo
Prediction alignment
3.490
4525580-4525597 R
tatcg ACGGGGATCGCTACCAGA ttaac
-
0
-
2.651
4525629-4525645 R
ggcaa AGAGCAATAACCCTTCT gcgat
-
0
-
 
Critical MAP values:
p=0.01
7.30
p=0.05
6.05
p=0.1
5.26
p=0.2
4.60

Click here to go back