slpA
 
Information for slpA, and also upstream and downstream flanking genes:
Genome coordinates
Orientation
Gene type
Name
EcoGene
Annotation
25207-25701
+
CDS
prolipoprotein signal peptidase (SPase II)
25826-26275
+
CDS
slpA
probable FKBX-type 16KD peptidyl-prolyl cis-trans isomerase (a rotamase)
26277-27227
+
CDS
control of stringent response; involved in penicillin tolerance
 
Reported regulatory sites for slpA:
Genome coordinates
Source
Transcription factor
Transcription factor annotation
 
Species with an ortholog: PA SP ST EC VC YP
 
Predictions with an average map value >= the critical MAP value (p=0.05):
Avg. MAP
Genome coordinates
Sequence
Site type
Overlap (bp)
Repeat
Model logo
Prediction logo
Prediction alignment
 
Predictions with an average map value < the critical MAP value (p=0.05):
Avg. MAP
Genome coordinates
Sequence
Site type
Overlap (bp)
Repeat
Model logo
Prediction logo
Prediction alignment
3.348
25764-25779
atcgt AGGCCGGATAAGGCGT ttacg
-
0
REP2b (16)
3.348
25782-25797
cgttt ACGCCGCATCCGGCAA aaatc
-
0
REP2b (14)
 
Critical MAP values:
p=0.01
5.41
p=0.05
4.01
p=0.1
3.43
p=0.2
2.86

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