slyA
 
Information for slyA, and also upstream and downstream flanking genes:
Genome coordinates
Orientation
Gene type
Name
EcoGene
Annotation
1717900-1718367
+
CDS
putative outer membrane protein
1718414-1718854
-
CDS
slyA
transcriptional regulator for cryptic hemolysin
1719049-1719285
+
CDS
orf; hypothetical protein
 
Reported regulatory sites for slyA:
Genome coordinates
Source
Transcription factor
Transcription factor annotation
 
Species with an ortholog: PA SP ST EC YP
 
Predictions with an average map value >= the critical MAP value (p=0.05):
Avg. MAP
Genome coordinates
Sequence
Site type
Overlap (bp)
Repeat
Model logo
Prediction logo
Prediction alignment
6.336
1718861-1718880 R
cataa TATCTTAGCAAGCTAATTAT aagga
-
0
-
 
Predictions with an average map value < the critical MAP value (p=0.05):
Avg. MAP
Genome coordinates
Sequence
Site type
Overlap (bp)
Repeat
Model logo
Prediction logo
Prediction alignment
3.844
1718923-1718946 R
cggta ACCAAATGCAGCAATACATTTGTT ttagc
-
0
-
2.059
1718992-1719015 R
ttgcg TTAGATTAATAAATATTCTTTAAG tgcga
-
0
-
2.059
1718892-1718915 R
agcaa TACAATTGCTGCACACTATTCTAA aagcc
-
0
-
 
Critical MAP values:
p=0.01
6.03
p=0.05
4.63
p=0.1
3.98
p=0.2
3.37

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