|
slyB
|
| |
| Information
for slyB, and also upstream and downstream flanking genes: |
|
Genome
coordinates
|
Orientation
|
Gene
type
|
Name
|
EcoGene
|
Annotation
|
|
1716517-1717626
|
-
|
CDS
|
|
|
orf; hypothetical protein
|
|
1717900-1718367
|
+
|
CDS
|
slyB
|
|
putative outer membrane protein
|
|
1718414-1718854
|
-
|
CDS
|
|
|
transcriptional regulator for cryptic hemolysin
|
|
| |
Reported regulatory
sites for slyB:
|
Genome
coordinates
|
Source
|
Transcription
factor
|
Transcription
factor annotation
|
|
| |
| Species with
an ortholog: HI PA ST EC YP |
| |
Predictions
with an average map value >= the critical MAP value (p=0.05):
|
Avg.
MAP
|
Genome
coordinates
|
Sequence
|
Site
type
|
Overlap
(bp)
|
Repeat
|
Model
logo
|
Prediction
logo
|
Prediction
alignment
|
|
| |
Predictions
with an average map value < the critical MAP value (p=0.05):
|
Avg.
MAP
|
Genome
coordinates
|
Sequence
|
Site
type
|
Overlap
(bp)
|
Repeat
|
Model
logo
|
Prediction
logo
|
Prediction
alignment
|
|
1.718
|
1717814-1717837
|
tagaa CATGTAACCATGGATTCACATATG ccata
|
-
|
0
|
-
|
|
|
|
|
1.660
|
1717874-1717892
|
tggcg TTTCATGGTGAACAGGAGA ttttt
|
-
|
0
|
-
|
|
|
|
|
1.552
|
1717629-1717649
|
catag TTCATCCTTTTTCAATCTGAC gtttg
|
-
|
0
|
-
|
|
|
|
|
| |
Critical
MAP values:
|
p=0.01
|
6.03
|
|
p=0.05
|
4.63
|
|
p=0.1
|
3.98
|
|
p=0.2
|
3.37
|
|
|