slyB
 
Information for slyB, and also upstream and downstream flanking genes:
Genome coordinates
Orientation
Gene type
Name
EcoGene
Annotation
1716517-1717626
-
CDS
orf; hypothetical protein
1717900-1718367
+
CDS
slyB
putative outer membrane protein
1718414-1718854
-
CDS
transcriptional regulator for cryptic hemolysin
 
Reported regulatory sites for slyB:
Genome coordinates
Source
Transcription factor
Transcription factor annotation
 
Species with an ortholog: HI PA ST EC YP
 
Predictions with an average map value >= the critical MAP value (p=0.05):
Avg. MAP
Genome coordinates
Sequence
Site type
Overlap (bp)
Repeat
Model logo
Prediction logo
Prediction alignment
 
Predictions with an average map value < the critical MAP value (p=0.05):
Avg. MAP
Genome coordinates
Sequence
Site type
Overlap (bp)
Repeat
Model logo
Prediction logo
Prediction alignment
1.718
1717814-1717837
tagaa CATGTAACCATGGATTCACATATG ccata
-
0
-
1.660
1717874-1717892
tggcg TTTCATGGTGAACAGGAGA ttttt
-
0
-
1.552
1717629-1717649
catag TTCATCCTTTTTCAATCTGAC gtttg
-
0
-
 
Critical MAP values:
p=0.01
6.03
p=0.05
4.63
p=0.1
3.98
p=0.2
3.37

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