sms
 
Information for sms, and also upstream and downstream flanking genes:
Genome coordinates
Orientation
Gene type
Name
EcoGene
Annotation
4622464-4623432
+
CDS
3-phosphoserine phosphatase
4623481-4624863
+
CDS
sms
probable ATP-dependent protease
4624863-4626116
+
CDS
probable nadAB transcriptional regulator
 
Reported regulatory sites for sms:
Genome coordinates
Source
Transcription factor
Transcription factor annotation
 
Species with an ortholog: HI PA SP ST EC VC YP
 
Predictions with an average map value >= the critical MAP value (p=0.05):
Avg. MAP
Genome coordinates
Sequence
Site type
Overlap (bp)
Repeat
Model logo
Prediction logo
Prediction alignment
 
Predictions with an average map value < the critical MAP value (p=0.05):
Avg. MAP
Genome coordinates
Sequence
Site type
Overlap (bp)
Repeat
Model logo
Prediction logo
Prediction alignment
1.405
4623434-4623449
gtaat TGCTCGCCCGCCATCC tgcgg
-
0
-
1.405
4623450-4623465
catcc TGCGGGCGGCACAGCA ttaac
-
0
-
 
Critical MAP values:
p=0.01
4.80
p=0.05
3.45
p=0.1
2.95
p=0.2
2.42

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