smtA
 
Information for smtA, and also upstream and downstream flanking genes:
Genome coordinates
Orientation
Gene type
Name
EcoGene
Annotation
971845-972624
-
CDS
orf; hypothetical protein
972760-973545
+
CDS
smtA
S-adenosylmethionine-dependent methyltransferase
973542-974864
+
CDS
mukF protein (killing factor KICB)
 
Reported regulatory sites for smtA:
Genome coordinates
Source
Transcription factor
Transcription factor annotation
 
Species with an ortholog: PA SP ST EC VC YP
 
Predictions with an average map value >= the critical MAP value (p=0.05):
Avg. MAP
Genome coordinates
Sequence
Site type
Overlap (bp)
Repeat
Model logo
Prediction logo
Prediction alignment
 
Predictions with an average map value < the critical MAP value (p=0.05):
Avg. MAP
Genome coordinates
Sequence
Site type
Overlap (bp)
Repeat
Model logo
Prediction logo
Prediction alignment
3.475
972628-972651
atcct TTCTGGTTCCTTTTTTAACCATAT agcaa
-
0
-
3.475
972691-972714
gttca TTCTCGCCGTGGCTGTGACAAAAT agcgt
-
0
-
2.961
972719-972735
tagcg TCTTTATCAGAAAACGT cttag
-
0
-
2.638
972674-972690
gatat TACACCAGACGGGTTCA ttctc
-
0
-
 
Critical MAP values:
p=0.01
5.41
p=0.05
4.01
p=0.1
3.43
p=0.2
2.86

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