|
solA
|
| |
| Information
for solA, and also upstream and downstream flanking genes: |
|
Genome
coordinates
|
Orientation
|
Gene
type
|
Name
|
EcoGene
|
Annotation
|
|
1118530-1118670
|
-
|
CDS
|
|
|
orf; hypothetical protein
|
|
1118691-1119809
|
-
|
CDS
|
solA
|
|
sarcosine oxidase-like protein
|
|
1119924-1120178
|
-
|
CDS
|
|
|
orf; hypothetical protein
|
|
| |
Reported regulatory
sites for solA:
|
Genome
coordinates
|
Source
|
Transcription
factor
|
Transcription
factor annotation
|
|
| |
| Species with
an ortholog: ST EC YP |
| |
Predictions
with an average map value >= the critical MAP value (p=0.05):
|
Avg.
MAP
|
Genome
coordinates
|
Sequence
|
Site
type
|
Overlap
(bp)
|
Repeat
|
Model
logo
|
Prediction
logo
|
Prediction
alignment
|
|
| |
Predictions
with an average map value < the critical MAP value (p=0.05):
|
Avg.
MAP
|
Genome
coordinates
|
Sequence
|
Site
type
|
Overlap
(bp)
|
Repeat
|
Model
logo
|
Prediction
logo
|
Prediction
alignment
|
|
3.272
|
1119843-1119866 R
|
tgggt TGTATATCTGCATTCAGTTAATTA ctctg
|
-
|
0
|
-
|
|
|
|
|
0.250
|
1119901-1119923 R
|
attaa CATGACATGACCATCCACCCAAA aggca
|
-
|
0
|
-
|
|
|
|
|
0.250
|
1119819-1119841 R
|
attac TCTGCTTAAACCATGAGAGCAGA gagaa
|
-
|
0
|
-
|
|
|
|
|
| |
Critical
MAP values:
|
p=0.01
|
7.30
|
|
p=0.05
|
6.05
|
|
p=0.1
|
5.26
|
|
p=0.2
|
4.60
|
|
|