sppA
 
Information for sppA, and also upstream and downstream flanking genes:
Genome coordinates
Orientation
Gene type
Name
EcoGene
Annotation
1846149-1846700
-
CDS
orf; hypothetical protein
1846861-1848717
+
CDS
sppA
protease IV; a signal peptide peptidase
1848884-1849900
+
CDS
cytoplasmic L-asparaginase I
 
Reported regulatory sites for sppA:
Genome coordinates
Source
Transcription factor
Transcription factor annotation
 
Species with an ortholog: HI SP ST EC VC YP
 
Predictions with an average map value >= the critical MAP value (p=0.05):
Avg. MAP
Genome coordinates
Sequence
Site type
Overlap (bp)
Repeat
Model logo
Prediction logo
Prediction alignment
 
Predictions with an average map value < the critical MAP value (p=0.05):
Avg. MAP
Genome coordinates
Sequence
Site type
Overlap (bp)
Repeat
Model logo
Prediction logo
Prediction alignment
3.605
1846732-1846755
ttcac AAAATTAACACGAGAGTGGATTTT gttac
-
0
-
3.132
1846794-1846817
taccg GTTGGGTCATTACGATAACCACAT ctatt
-
0
-
1.368
1846704-1846727
atttg ATTAACTCCTGTCGTGATATTTAT tcaca
-
0
-
 
Critical MAP values:
p=0.01
5.41
p=0.05
4.01
p=0.1
3.43
p=0.2
2.86

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