|
spr
|
| |
| Information
for spr, and also upstream and downstream flanking genes: |
|
Genome
coordinates
|
Orientation
|
Gene
type
|
Name
|
EcoGene
|
Annotation
|
|
2266838-2267587
|
+
|
CDS
|
|
|
orf; hypothetical protein
|
|
2267999-2268565
|
+
|
CDS
|
spr
|
|
putative lipoprotein
|
|
2268746-2270302
|
+
|
CDS
|
|
|
orf; hypothetical protein
|
|
| |
Reported regulatory
sites for spr:
|
Genome
coordinates
|
Source
|
Transcription
factor
|
Transcription
factor annotation
|
|
| |
| Species with
an ortholog: HI SP ST EC YP |
| |
Predictions
with an average map value >= the critical MAP value (p=0.05):
|
Avg.
MAP
|
Genome
coordinates
|
Sequence
|
Site
type
|
Overlap
(bp)
|
Repeat
|
Model
logo
|
Prediction
logo
|
Prediction
alignment
|
|
| |
Predictions
with an average map value < the critical MAP value (p=0.05):
|
Avg.
MAP
|
Genome
coordinates
|
Sequence
|
Site
type
|
Overlap
(bp)
|
Repeat
|
Model
logo
|
Prediction
logo
|
Prediction
alignment
|
|
3.611
|
2267766-2267781
|
tcact TTTTCTTATAAAAAAT catgt
|
-
|
0
|
-
|
|
|
|
|
3.611
|
2267948-2267963
|
tggca TTTTTTTATAACGATA tttgt
|
-
|
0
|
-
|
|
|
|
|
2.864
|
2267868-2267891
|
atata ATTTTGTGCGTTAGTCCACAGATT tggcc
|
-
|
0
|
-
|
|
|
|
|
2.136
|
2267965-2267988
|
gatat TTGTCGTTAAGGACTTCAAGGGAA aacaa
|
-
|
0
|
-
|
|
|
|
|
| |
Critical
MAP values:
|
p=0.01
|
6.03
|
|
p=0.05
|
4.63
|
|
p=0.1
|
3.98
|
|
p=0.2
|
3.37
|
|
|