srlR
 
Information for srlR, and also upstream and downstream flanking genes:
Genome coordinates
Orientation
Gene type
Name
EcoGene
Annotation
2826644-2827003
+
CDS
glucitol operon activator
2827070-2827843
+
CDS
srlR
regulator for gut (srl); glucitol operon
2827875-2828801
+
CDS
orf; hypothetical protein
 
Reported regulatory sites for srlR:
Genome coordinates
Source
Transcription factor
Transcription factor annotation
 
Species with an ortholog: PA SP ST EC VC
 
Predictions with an average map value >= the critical MAP value (p=0.05):
Avg. MAP
Genome coordinates
Sequence
Site type
Overlap (bp)
Repeat
Model logo
Prediction logo
Prediction alignment
 
Predictions with an average map value < the critical MAP value (p=0.05):
Avg. MAP
Genome coordinates
Sequence
Site type
Overlap (bp)
Repeat
Model logo
Prediction logo
Prediction alignment
3.255
2827031-2827051
ttgcg AAGTTATCATTTTGAAACCTA aatca
-
0
-
1.450
2827001-2827023
gtgga TAATTTCGTTGTGAATGTTACTT gcttg
-
0
-
 
Critical MAP values:
p=0.01
5.40
p=0.05
4.29
p=0.1
3.77
p=0.2
3.19

Click here to go back