ssb
 
Information for ssb, and also upstream and downstream flanking genes:
Genome coordinates
Orientation
Gene type
Name
EcoGene
Annotation
4268628-4271450
-
CDS
excision nuclease subunit A
4271704-4272240
+
CDS
ssb
ssDNA-binding protein
4272339-4272689
-
CDS
orf; hypothetical protein
 
Reported regulatory sites for ssb:
Genome coordinates
Source
Transcription factor
Transcription factor annotation
4271534-4271553
lexA
regulator for SOS(lexA) regulon
 
Species with an ortholog: HI PA SP ST EC VC YP
 
Predictions with an average map value >= the critical MAP value (p=0.05):
Avg. MAP
Genome coordinates
Sequence
Site type
Overlap (bp)
Repeat
Model logo
Prediction logo
Prediction alignment
3.614
4271516-4271532
acggt TAATTATGACACAAATT gacct
-
0
-
 
Predictions with an average map value < the critical MAP value (p=0.05):
Avg. MAP
Genome coordinates
Sequence
Site type
Overlap (bp)
Repeat
Model logo
Prediction logo
Prediction alignment
2.372
4271535-4271556
attga CCTGAATGAATATACAGTATTG gaatg
lexA
19
-
0.878
4271490-4271512
tggca TGGTGCTACCGGCGATCACAAAC ggtta
-
0
-
0.878
4271604-4271626
tttgt TTCCCGGAACCGAGGTCACAACA tagta
-
0
-
 
Critical MAP values:
p=0.01
4.80
p=0.05
3.45
p=0.1
2.95
p=0.2
2.42

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