|
sseB
|
| |
| Information
for sseB, and also upstream and downstream flanking genes: |
|
Genome
coordinates
|
Orientation
|
Gene
type
|
Name
|
EcoGene
|
Annotation
|
|
2650355-2651359
|
+
|
CDS
|
|
|
putative thiosulfate sulfurtransferase
|
|
2652177-2652962
|
-
|
CDS
|
sseB
|
|
enhanced serine sensitivity
|
|
2653095-2654465
|
-
|
CDS
|
|
|
putative peptidase
|
|
| |
Reported regulatory
sites for sseB:
|
Genome
coordinates
|
Source
|
Transcription
factor
|
Transcription
factor annotation
|
|
| |
| Species with
an ortholog: ST EC YP |
| |
Predictions
with an average map value >= the critical MAP value (p=0.05):
|
Avg.
MAP
|
Genome
coordinates
|
Sequence
|
Site
type
|
Overlap
(bp)
|
Repeat
|
Model
logo
|
Prediction
logo
|
Prediction
alignment
|
|
| |
Predictions
with an average map value < the critical MAP value (p=0.05):
|
Avg.
MAP
|
Genome
coordinates
|
Sequence
|
Site
type
|
Overlap
(bp)
|
Repeat
|
Model
logo
|
Prediction
logo
|
Prediction
alignment
|
|
4.346
|
2653050-2653065 R
|
acgcc TTATCCGGCCTACAAA ttctg
|
-
|
0
|
REP183b (13)
|
|
|
|
|
4.346
|
2653006-2653021 R
|
aatcc CTTGTAGGCCTGATAA gcgta
|
-
|
0
|
REPv183a (13)
|
|
|
|
|
0.561
|
2653027-2653046 R
|
aattc TGCAAATTCAACAAATTGCG aatcc
|
-
|
0
|
-
|
|
|
|
|
0.326
|
2653068-2653084 R
|
tatgc CGGATGCGGCGTAAACG cctta
|
-
|
0
|
REP183b (17)
|
|
|
|
|
0.326
|
2652974-2652990 R
|
tcagg CATTTGCGCCCCGAACG ttgaa
|
-
|
0
|
REPv183a (1)
|
|
|
|
|
| |
Critical
MAP values:
|
p=0.01
|
7.30
|
|
p=0.05
|
6.05
|
|
p=0.1
|
5.26
|
|
p=0.2
|
4.60
|
|
|