sucC
 
Information for sucC, and also upstream and downstream flanking genes:
Genome coordinates
Orientation
Gene type
Name
EcoGene
Annotation
760745-761962
+
CDS
2-oxoglutarate dehydrogenase (dihydrolipoyltranssuccinase E2 component)
762237-763403
+
CDS
sucC
succinyl-CoA synthetase; beta subunit
763403-764272
+
CDS
succinyl-CoA synthetase; alpha subunit
 
Reported regulatory sites for sucC:
Genome coordinates
Source
Transcription factor
Transcription factor annotation
 
Species with an ortholog: HI PA SP ST EC VC YP
 
Predictions with an average map value >= the critical MAP value (p=0.05):
Avg. MAP
Genome coordinates
Sequence
Site type
Overlap (bp)
Repeat
Model logo
Prediction logo
Prediction alignment
3.567
761992-762015
agacc GGATAAGGCATTATCGCCTTCTCC ggcaa
-
0
REP68a (24)
3.567
762081-762104
aggtc GGATAAGGCGCAAGCGCCGCATCC gacaa
-
0
REP68c (24)
 
Predictions with an average map value < the critical MAP value (p=0.05):
Avg. MAP
Genome coordinates
Sequence
Site type
Overlap (bp)
Repeat
Model logo
Prediction logo
Prediction alignment
1.252
762019-762041
ccggc AATTGAAGCCTGATGCGACGCTG acgcg
-
0
REP68b (16)
1.252
762108-762130
ccgac AAGCGATGCCTGATGTGACGTTT aacgt
-
0
REP68d (16)
0.994
761960-761975
acgtg TAGTAGTTTAAGTTTC acctg
-
0
-
0.994
762201-762216
cggtt TAAAAGATAACGATTA ctgaa
-
0
-
 
Critical MAP values:
p=0.01
4.80
p=0.05
3.45
p=0.1
2.95
p=0.2
2.42

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