sugE
 
Information for sugE, and also upstream and downstream flanking genes:
Genome coordinates
Orientation
Gene type
Name
EcoGene
Annotation
4373277-4373843
+
CDS
elongation factor P (EF-P)
4374303-4374770
+
CDS
sugE
suppresses groEL; may be chaperone
4374767-4375300
-
CDS
outer membrane lipoprotein (lipocalin)
 
Reported regulatory sites for sugE:
Genome coordinates
Source
Transcription factor
Transcription factor annotation
 
Species with an ortholog: PA EC
 
Predictions with an average map value >= the critical MAP value (p=0.05):
Avg. MAP
Genome coordinates
Sequence
Site type
Overlap (bp)
Repeat
Model logo
Prediction logo
Prediction alignment
2.737
4373852-4373875
ggttg TGGTGCGGCCTGCAGGCTGCACCA tcact
-
0
-
2.737
4374250-4374273
atttc TGGCGCAGCAACGAAAGCGCAGCA ataag
-
0
-
2.696
4374196-4374215
gcctg CAACACCACGCGTGGCGTTG gtgaa
-
0
-
-
 
Predictions with an average map value < the critical MAP value (p=0.05):
Avg. MAP
Genome coordinates
Sequence
Site type
Overlap (bp)
Repeat
Model logo
Prediction logo
Prediction alignment
0.537
4373986-4374001
caaac ATCTCGGCAACTCCAT ctctc
-
0
-
0.537
4374231-4374246
ttctg ATGGCGGTAACGCGAT ttctg
-
0
-
 
Critical MAP values:
p=0.01
3.34
p=0.05
2.41
p=0.1
2.01
p=0.2
1.55

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