|
surA
|
| |
| Information
for surA, and also upstream and downstream flanking genes: |
|
Genome
coordinates
|
Orientation
|
Gene
type
|
Name
|
EcoGene
|
Annotation
|
|
52427-53416
|
-
|
CDS
|
|
|
pyridoxine biosynthesis
|
|
53416-54702
|
-
|
CDS
|
surA
|
|
survival protein
|
|
54755-57109
|
-
|
CDS
|
|
|
organic solvent tolerance
|
|
| |
Reported regulatory
sites for surA:
|
Genome
coordinates
|
Source
|
Transcription
factor
|
Transcription
factor annotation
|
|
| |
| Species with
an ortholog: HI PA SP ST EC VC YP |
| |
Predictions
with an average map value >= the critical MAP value (p=0.05):
|
Avg.
MAP
|
Genome
coordinates
|
Sequence
|
Site
type
|
Overlap
(bp)
|
Repeat
|
Model
logo
|
Prediction
logo
|
Prediction
alignment
|
|
| |
Predictions
with an average map value < the critical MAP value (p=0.05):
|
Avg.
MAP
|
Genome
coordinates
|
Sequence
|
Site
type
|
Overlap
(bp)
|
Repeat
|
Model
logo
|
Prediction
logo
|
Prediction
alignment
|
|
3.402
|
54735-54757 R
|
ctttg TGATTTGTTGATTTACCACGTAA tccgc
|
-
|
0
|
-
|
|
|
|
|
3.402
|
54707-54729 R
|
tccgc AGTGCGGTTAATTGAAATGGAAA aagta
|
-
|
0
|
-
|
|
|
|
|
| |
Critical
MAP values:
|
p=0.01
|
4.80
|
|
p=0.05
|
3.45
|
|
p=0.1
|
2.95
|
|
p=0.2
|
2.42
|
|
|