|
tag
|
| |
| Information
for tag, and also upstream and downstream flanking genes: |
|
Genome
coordinates
|
Orientation
|
Gene
type
|
Name
|
EcoGene
|
Annotation
|
|
3709865-3710569
|
-
|
CDS
|
|
|
putative lipase
|
|
3710721-3711284
|
+
|
CDS
|
tag
|
|
3-methyl-adenine DNA glycosylase I; constitutive
|
|
3711281-3711721
|
+
|
CDS
|
|
|
orf; hypothetical protein
|
|
| |
Reported regulatory
sites for tag:
|
Genome
coordinates
|
Source
|
Transcription
factor
|
Transcription
factor annotation
|
|
| |
| Species with
an ortholog: HI PA SP ST EC VC YP |
| |
Predictions
with an average map value >= the critical MAP value (p=0.05):
|
Avg.
MAP
|
Genome
coordinates
|
Sequence
|
Site
type
|
Overlap
(bp)
|
Repeat
|
Model
logo
|
Prediction
logo
|
Prediction
alignment
|
|
| |
Predictions
with an average map value < the critical MAP value (p=0.05):
|
Avg.
MAP
|
Genome
coordinates
|
Sequence
|
Site
type
|
Overlap
(bp)
|
Repeat
|
Model
logo
|
Prediction
logo
|
Prediction
alignment
|
|
1.569
|
3710570-3710592
|
aacac GACTCCAGGGAAGAGCCGAATTC ggcaa
|
-
|
0
|
-
|
|
|
|
|
1.328
|
3710593-3710613
|
aattc GGCAATATTATTGTCATTGTA tgaag
|
-
|
0
|
-
|
|
|
|
|
1.328
|
3710634-3710654
|
atagt AGCCCTGTATTAAATATTGAC ttttt
|
-
|
0
|
-
|
|
|
|
|
1.314
|
3710650-3710673
|
aaata TTGACTTTTTCACCGATGCGTCAA gaaaa
|
-
|
0
|
-
|
|
|
|
|
| |
Critical
MAP values:
|
p=0.01
|
4.80
|
|
p=0.05
|
3.45
|
|
p=0.1
|
2.95
|
|
p=0.2
|
2.42
|
|
|