tdk
 
Information for tdk, and also upstream and downstream flanking genes:
Genome coordinates
Orientation
Gene type
Name
EcoGene
Annotation
1291732-1292145
-
CDS
DNA-binding protein HLP-II (HU; BH2; HD; NS); pleiotropic regulator
1292750-1293367
+
CDS
tdk
thymidine kinase
1293649-1294239
-
CDS
orf; hypothetical protein
 
Reported regulatory sites for tdk:
Genome coordinates
Source
Transcription factor
Transcription factor annotation
 
Species with an ortholog: HI SP ST EC VC YP
 
Predictions with an average map value >= the critical MAP value (p=0.05):
Avg. MAP
Genome coordinates
Sequence
Site type
Overlap (bp)
Repeat
Model logo
Prediction logo
Prediction alignment
 
Predictions with an average map value < the critical MAP value (p=0.05):
Avg. MAP
Genome coordinates
Sequence
Site type
Overlap (bp)
Repeat
Model logo
Prediction logo
Prediction alignment
1.245
1292250-1292271
gttct TTATTTTGTGCCGCCAATAAAT atctt
-
0
-
1.245
1292418-1292439
tctgt ATTAGTTGTGTTTACGAGAATT cccta
fis
16
-
1.002
1292716-1292734
cagcc AACTTTATTTCATATCATT gaggg
-
0
-
0.942
1292694-1292710
actga CGAATTATGATAAACTC cagcc
-
0
-
 
Critical MAP values:
p=0.01
5.41
p=0.05
4.01
p=0.1
3.43
p=0.2
2.86

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