|
tesB
|
| |
| Information
for tesB, and also upstream and downstream flanking genes: |
|
Genome
coordinates
|
Orientation
|
Gene
type
|
Name
|
EcoGene
|
Annotation
|
|
472190-473476
|
+
|
CDS
|
|
|
probable ammonium transporter
|
|
473525-474385
|
-
|
CDS
|
tesB
|
|
acyl-CoA thioesterase II
|
|
474603-475175
|
+
|
CDS
|
|
|
glycoprotein/polysaccharide metabolism
|
|
| |
Reported regulatory
sites for tesB:
|
Genome
coordinates
|
Source
|
Transcription
factor
|
Transcription
factor annotation
|
|
| |
| Species with
an ortholog: HI PA SP ST EC VC YP |
| |
Predictions
with an average map value >= the critical MAP value (p=0.05):
|
Avg.
MAP
|
Genome
coordinates
|
Sequence
|
Site
type
|
Overlap
(bp)
|
Repeat
|
Model
logo
|
Prediction
logo
|
Prediction
alignment
|
|
| |
Predictions
with an average map value < the critical MAP value (p=0.05):
|
Avg.
MAP
|
Genome
coordinates
|
Sequence
|
Site
type
|
Overlap
(bp)
|
Repeat
|
Model
logo
|
Prediction
logo
|
Prediction
alignment
|
|
1.460
|
474530-474549 R
|
gaaga GTGGTTAACAAAATAGTAAC gtcaa
|
-
|
0
|
-
|
|
|
|
|
1.460
|
474463-474482 R
|
agccc GTAATTCAGACCATTGCACC catcg
|
-
|
0
|
-
|
|
|
|
|
1.305
|
474501-474524 R
|
gtcaa CAAGTGTGGCACACATCACGCATT tctgc
|
-
|
0
|
-
|
|
|
|
|
1.305
|
474421-474444 R
|
gcaaa TTTGCGTTATACTCAACTCACTTT ggctt
|
-
|
0
|
-
|
|
|
|
|
| |
Critical
MAP values:
|
p=0.01
|
4.80
|
|
p=0.05
|
3.45
|
|
p=0.1
|
2.95
|
|
p=0.2
|
2.42
|
|
|