thiG
 
Information for thiG, and also upstream and downstream flanking genes:
Genome coordinates
Orientation
Gene type
Name
EcoGene
Annotation
4188313-4189446
-
CDS
thiamin biosynthesis; thiazole moiety
4189443-4190288
-
CDS
thiG
thiamin biosynthesis; thiazole moiety
4190399-4191136
-
CDS
thiamin biosynthesis; thiazole moiety
 
Reported regulatory sites for thiG:
Genome coordinates
Source
Transcription factor
Transcription factor annotation
 
Species with an ortholog: SP ST EC YP
 
Predictions with an average map value >= the critical MAP value (p=0.05):
Avg. MAP
Genome coordinates
Sequence
Site type
Overlap (bp)
Repeat
Model logo
Prediction logo
Prediction alignment
 
Predictions with an average map value < the critical MAP value (p=0.05):
Avg. MAP
Genome coordinates
Sequence
Site type
Overlap (bp)
Repeat
Model logo
Prediction logo
Prediction alignment
4.339
4190364-4190385 R
cgatg CAGTGCGCCGCCGGGCAAACTG ttcac
-
0
-
2.602
4190300-4190315 R
ggctc TGGCGATTAATCAGCA aatcg
-
0
-
0.614
4190316-4190331 R
aacga CAAGCGGGCGCGGCTC tggcg
-
0
-
 
Critical MAP values:
p=0.01
6.66
p=0.05
5.31
p=0.1
4.59
p=0.2
3.95

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