|
thiL
|
| |
| Information
for thiL, and also upstream and downstream flanking genes: |
|
Genome
coordinates
|
Orientation
|
Gene
type
|
Name
|
EcoGene
|
Annotation
|
|
434361-434780
|
+
|
CDS
|
|
|
transcription termination; L factor
|
|
434858-435835
|
+
|
CDS
|
thiL
|
|
thiamin-monophosphate kinase
|
|
435813-436331
|
+
|
CDS
|
|
|
phosphatidylglycerophosphatase
|
|
| |
Reported regulatory
sites for thiL:
|
Genome
coordinates
|
Source
|
Transcription
factor
|
Transcription
factor annotation
|
|
| |
| Species with
an ortholog: HI PA SP ST EC VC YP |
| |
Predictions
with an average map value >= the critical MAP value (p=0.05):
|
Avg.
MAP
|
Genome
coordinates
|
Sequence
|
Site
type
|
Overlap
(bp)
|
Repeat
|
Model
logo
|
Prediction
logo
|
Prediction
alignment
|
|
| |
Predictions
with an average map value < the critical MAP value (p=0.05):
|
Avg.
MAP
|
Genome
coordinates
|
Sequence
|
Site
type
|
Overlap
(bp)
|
Repeat
|
Model
logo
|
Prediction
logo
|
Prediction
alignment
|
|
1.652
|
434833-434856
|
ttttc TTTTTTACCTGCTGAGGCATAACG tatgg
|
-
|
0
|
-
|
|
|
|
|
0.951
|
434816-434831
|
ttcca TGATCGCCGGCCTTTT ctttt
|
-
|
0
|
-
|
|
|
|
|
0.548
|
434803-434823
|
tcacg GAAGACCGTTCCATGATCGCC ggcct
|
-
|
0
|
-
|
|
|
|
|
| |
Critical
MAP values:
|
p=0.01
|
4.80
|
|
p=0.05
|
3.45
|
|
p=0.1
|
2.95
|
|
p=0.2
|
2.42
|
|
|