|
tig
|
| |
| Information
for tig, and also upstream and downstream flanking genes: |
|
Genome
coordinates
|
Orientation
|
Gene
type
|
Name
|
EcoGene
|
Annotation
|
|
453663-454013
|
+
|
CDS
|
|
|
possible regulator of murein genes
|
|
454357-455655
|
+
|
CDS
|
tig
|
|
trigger factor; a molecular chaperone involved in cell division
|
|
455901-456524
|
+
|
CDS
|
|
|
ATP-dependent proteolytic subunit of clpA-clpP serine protease; heat shock protein F21.5
|
|
| |
Reported regulatory
sites for tig:
|
Genome
coordinates
|
Source
|
Transcription
factor
|
Transcription
factor annotation
|
|
| |
| Species with
an ortholog: HI PA SP ST EC VC YP |
| |
Predictions
with an average map value >= the critical MAP value (p=0.05):
|
Avg.
MAP
|
Genome
coordinates
|
Sequence
|
Site
type
|
Overlap
(bp)
|
Repeat
|
Model
logo
|
Prediction
logo
|
Prediction
alignment
|
|
4.597
|
454068-454089
|
tatga AAAACGGCCTGCGGGCCGTTTT gtttt
|
-
|
0
|
-
|
|
|
|
|
3.833
|
454277-454294
|
aagaa CATCCCGGTTCCGCGAAG ccaac
|
-
|
0
|
-
|
|
|
|
|
3.660
|
454201-454219
|
gtgat GCCGCTATAATGCCGCGTC ctatt
|
-
|
0
|
-
|
|
|
|
|
| |
Predictions
with an average map value < the critical MAP value (p=0.05):
|
Avg.
MAP
|
Genome
coordinates
|
Sequence
|
Site
type
|
Overlap
(bp)
|
Repeat
|
Model
logo
|
Prediction
logo
|
Prediction
alignment
|
|
| |
Critical
MAP values:
|
p=0.01
|
4.80
|
|
p=0.05
|
3.45
|
|
p=0.1
|
2.95
|
|
p=0.2
|
2.42
|
|
|