tktA
 
Information for tktA, and also upstream and downstream flanking genes:
Genome coordinates
Orientation
Gene type
Name
EcoGene
Annotation
3076906-3077349
-
CDS
PTS system; mannitol-specific enzyme II component; cryptic
3077663-3079654
-
CDS
tktA
transketolase 1 isozyme
3079806-3080690
+
CDS
orf; hypothetical protein
 
Reported regulatory sites for tktA:
Genome coordinates
Source
Transcription factor
Transcription factor annotation
 
Species with an ortholog: HI PA SP ST EC VC YP
 
Predictions with an average map value >= the critical MAP value (p=0.05):
Avg. MAP
Genome coordinates
Sequence
Site type
Overlap (bp)
Repeat
Model logo
Prediction logo
Prediction alignment
4.114
3079763-3079785 R
gaagc GGCAAAAGGATGTTCCATGTACA tgacg
-
0
-
4.114
3079725-3079747 R
cttgc GGTAAATTGTTGGCAAATTTTCC ggcgt
-
0
-
 
Predictions with an average map value < the critical MAP value (p=0.05):
Avg. MAP
Genome coordinates
Sequence
Site type
Overlap (bp)
Repeat
Model logo
Prediction logo
Prediction alignment
2.666
3079660-3079678 R
tgccc TTCATCATCCGATCTGGAG tcaaa
-
0
-
1.492
3079697-3079720 R
cggcg TAGCCCAAAACGCGCTGTCGTCAA gtcgt
-
0
-
 
Critical MAP values:
p=0.01
4.80
p=0.05
3.45
p=0.1
2.95
p=0.2
2.42

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