|
tolA
|
| |
| Information
for tolA, and also upstream and downstream flanking genes: |
|
Genome
coordinates
|
Orientation
|
Gene
type
|
Name
|
EcoGene
|
Annotation
|
|
775072-775500
|
+
|
CDS
|
|
|
putative inner membrane protein; involved in the tonB-independent uptake of group A colicins
|
|
775565-776830
|
+
|
CDS
|
tolA
|
|
membrane spanning protein; required for outer membrane integrity
|
|
776963-778255
|
+
|
CDS
|
|
|
periplasmic protein involved in the tonb-independent uptake of group A colicins
|
|
| |
Reported regulatory
sites for tolA:
|
Genome
coordinates
|
Source
|
Transcription
factor
|
Transcription
factor annotation
|
|
| |
| Species with
an ortholog: HI PA SP ST EC VC YP |
| |
Predictions
with an average map value >= the critical MAP value (p=0.05):
|
Avg.
MAP
|
Genome
coordinates
|
Sequence
|
Site
type
|
Overlap
(bp)
|
Repeat
|
Model
logo
|
Prediction
logo
|
Prediction
alignment
|
|
| |
Predictions
with an average map value < the critical MAP value (p=0.05):
|
Avg.
MAP
|
Genome
coordinates
|
Sequence
|
Site
type
|
Overlap
(bp)
|
Repeat
|
Model
logo
|
Prediction
logo
|
Prediction
alignment
|
|
2.808
|
775535-775551
|
gcggg TAACAGGCGAACAGTTT ttgga
|
-
|
0
|
-
|
|
|
|
|
2.312
|
775513-775532
|
cgttt CCCTTGCTTGAAAGAGAGCG ggtaa
|
-
|
0
|
-
|
|
|
|
|
| |
Critical
MAP values:
|
p=0.01
|
4.80
|
|
p=0.05
|
3.45
|
|
p=0.1
|
2.95
|
|
p=0.2
|
2.42
|
|
|