tonB
 
Information for tonB, and also upstream and downstream flanking genes:
Genome coordinates
Orientation
Gene type
Name
EcoGene
Annotation
1308593-1308985
-
CDS
orf; hypothetical protein
1309113-1309832
+
CDS
tonB
energy transducer; uptake of iron; cyanocobalimin; sensitivity to phages; colicins
1309872-1310270
-
CDS
orf; hypothetical protein
 
Reported regulatory sites for tonB:
Genome coordinates
Source
Transcription factor
Transcription factor annotation
1309047-1309064
fur
negative regulator
1309094-1309111
fur
negative regulator
 
Species with an ortholog: PA ST EC YP
 
Predictions with an average map value >= the critical MAP value (p=0.05):
Avg. MAP
Genome coordinates
Sequence
Site type
Overlap (bp)
Repeat
Model logo
Prediction logo
Prediction alignment
6.312
1309006-1309026
acgcc AAAAATGACATTTTCACTGAT cctga
-
0
-
6.312
1309051-1309071
tgaat ATGATTGCTATTTGCATTTAA aatcg
fur
14
-
 
Predictions with an average map value < the critical MAP value (p=0.05):
Avg. MAP
Genome coordinates
Sequence
Site type
Overlap (bp)
Repeat
Model logo
Prediction logo
Prediction alignment
2.662
1309094-1309112
tctac TGAAATGATTATGACTTCA atgac
fur
18
-
1.622
1309072-1309087
tttaa AATCGAGACCTGGTTT ttcta
-
0
-
 
Critical MAP values:
p=0.01
6.66
p=0.05
5.31
p=0.1
4.59
p=0.2
3.95

Click here to go back