torC
 
Information for torC, and also upstream and downstream flanking genes:
Genome coordinates
Orientation
Gene type
Name
EcoGene
Annotation
1056485-1057177
-
CDS
response transcriptional regulator for torA (sensor TorS)
1057307-1058479
+
CDS
torC
trimethylamine N-oxide reductase; cytochrome c-type subunit
1058479-1061025
+
CDS
trimethylamine N-oxide reductase subunit
 
Reported regulatory sites for torC:
Genome coordinates
Source
Transcription factor
Transcription factor annotation
1057227-1057236
torR
response transcriptional regulator for torA (sensor TorS)
1057196-1057205
torR
response transcriptional regulator for torA (sensor TorS)
1057206-1057215
torR
response transcriptional regulator for torA (sensor TorS)
1057249-1057258
torR
response transcriptional regulator for torA (sensor TorS)
 
Species with an ortholog: HI SP ST EC VC
 
Predictions with an average map value >= the critical MAP value (p=0.05):
Avg. MAP
Genome coordinates
Sequence
Site type
Overlap (bp)
Repeat
Model logo
Prediction logo
Prediction alignment
 
Predictions with an average map value < the critical MAP value (p=0.05):
Avg. MAP
Genome coordinates
Sequence
Site type
Overlap (bp)
Repeat
Model logo
Prediction logo
Prediction alignment
3.937
1057195-1057214
ctcat TCTGTTCATATCTGTTCATA ttctg
torR
19
-
3.937
1057248-1057267
gtgcc GCTGTTCATATTTGCTCATT aagat
torR
10
-
1.876
1057223-1057246
tgccg TAAGCCGTTCATCCTGACCAGTGC cgctg
torR
10
-
1.876
1057281-1057304
ttcac TAAACCATAATTCTACAGGGGTTA ttatg
-
0
-
 
Critical MAP values:
p=0.01
5.40
p=0.05
4.29
p=0.1
3.77
p=0.2
3.19

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