torR
 
Information for torR, and also upstream and downstream flanking genes:
Genome coordinates
Orientation
Gene type
Name
EcoGene
Annotation
1055484-1056512
+
CDS
part of regulation of tor operon; periplasmic
1056485-1057177
-
CDS
torR
response transcriptional regulator for torA (sensor TorS)
1057307-1058479
+
CDS
trimethylamine N-oxide reductase; cytochrome c-type subunit
 
Reported regulatory sites for torR:
Genome coordinates
Source
Transcription factor
Transcription factor annotation
1057196-1057205
torR
response transcriptional regulator for torA (sensor TorS)
1057206-1057215
torR
response transcriptional regulator for torA (sensor TorS)
 
Species with an ortholog: SP ST EC VC
 
Predictions with an average map value >= the critical MAP value (p=0.05):
Avg. MAP
Genome coordinates
Sequence
Site type
Overlap (bp)
Repeat
Model logo
Prediction logo
Prediction alignment
 
Predictions with an average map value < the critical MAP value (p=0.05):
Avg. MAP
Genome coordinates
Sequence
Site type
Overlap (bp)
Repeat
Model logo
Prediction logo
Prediction alignment
3.976
1057250-1057265 R
cttaa TGAGCAAATATGAACA gcggc
torR
9
-
3.976
1057197-1057212 R
gaata TGAACAGATATGAACA gaatg
torR
16
-
3.480
1057227-1057243 R
cggca CTGGTCAGGATGAACGG cttac
torR
10
-
1.887
1057281-1057304 R
cataa TAACCCCTGTAGAATTATGGTTTA gtgaa
-
0
-
 
Critical MAP values:
p=0.01
6.09
p=0.05
4.94
p=0.1
4.37
p=0.2
3.74

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